From my experience, I couldn't say much about just replacing CV-boots. It looks (to me) to be a harder job than simply replacing the whole axle (which is a little more expensive, but you don't have to mess with the CV boot clamp, which requires a special tool).
Either way - make sure you re-use the stock 12-point (triple-square) bolts to mount to the transmission flange, and keep those locking-plates. re-torque these carefully; by-the-book. I replaced my axle with a cheap aftermarket one, and they gave me allen bolts - which did NOT stay in. I was just very fortunate that I was pulling away from a stop sign when it finally broke loose (instead of at-speed on the freeway). If you don't want to re-use the 12-point bolts, you can order a new set on line. Worth it.