I operated the pump a bunch of times with the valves closed, and then with them open, and so on until no more bubbles came out. It was pretty easy, and my brake pedal is just as responsive as before. I didn't have a B manual, so I just did what VAG-COM told me to do when I used basic settings channel 001, then 002. This way, the pedal builds some prepressure for the pump to enough draw fluid, and when the valves are opened, and channel 002 is invoked, the bubbles shoot out of the bleeder valves. After repeating that about 10 (or more, I lost count) times, I bled conventionally, and saw no additional bubbles.
An 11mm line wrench did the trick. A straight wrench would probably have made me angry.
Wiring the indicator was exactly as outlined in the current flow diagram. I had to install a repair wire (000-979-131) between the pump and switch, and then to pin 14 of the green cluster connector. I used 22AWG for the cluster IDC. The other three signals were simply taken from the hazard switch with some IDC tap splices. Overall, the job was very easy, and brake/clutch bleeding was even easier than my expectations.
For 2000>>, I don't have a clue why your wiring is different. I had a ground wire on pin 14, and no wire on pin 15 at the pump. If that hasn't been figured out, I conjecture that the [ABS pin 15] signal goes to the main/engine ECU, and is relayed by CAN to the cluster (2000>> does use CAN, right?).